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  <front>
    <journal-meta><journal-id journal-id-type="publisher">SE</journal-id><journal-title-group>
    <journal-title>Solid Earth</journal-title>
    <abbrev-journal-title abbrev-type="publisher">SE</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Solid Earth</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1869-9529</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/se-15-23-2024</article-id><title-group><article-title>Modeling liquid transport in the Earth's mantle as two-phase flow: effect of an enforced positive porosity on liquid flow <?xmltex \hack{\break}?>and mass conservation</article-title><alt-title>Modeling liquid transport in the Earth's mantle as two-phase flow</alt-title>
      </title-group><?xmltex \runningtitle{Modeling liquid transport in the Earth's mantle as two-phase flow}?><?xmltex \runningauthor{C. Lee et al.}?>
      <contrib-group>
        <contrib contrib-type="author" equal-contrib="yes" corresp="yes" rid="aff1">
          <name><surname>Lee</surname><given-names>Changyeol</given-names></name>
          <email>changyeol.lee@yonsei.ac.kr</email>
        </contrib>
        <contrib contrib-type="author" equal-contrib="yes" corresp="no" rid="aff2">
          <name><surname>Cerpa</surname><given-names>Nestor G.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-0112-0138</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Han</surname><given-names>Dongwoo</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Wada</surname><given-names>Ikuko</given-names></name>
          
        </contrib>
        <aff id="aff1"><label>1</label><institution>Department of Earth System Sciences, Yonsei University, 03722 Seoul, Republic of Korea</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>Geosciences Montpellier, Université de Montpellier, CNRS, Université des Antilles, <?xmltex \hack{\break}?>Place Eugène Bataillon, 34095 Montpellier, France</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>Department of Earth and Environmental Sciences, University of Minnesota, 55455 Minneapolis, USA</institution>
        </aff><author-comment content-type="econtrib"><p>These authors contributed equally to this work.</p></author-comment>
      </contrib-group>
      <author-notes><corresp id="corr1">Changyeol Lee (changyeol.lee@yonsei.ac.kr)</corresp></author-notes><pub-date><day>17</day><month>January</month><year>2024</year></pub-date>
      
      <volume>15</volume>
      <issue>1</issue>
      <fpage>23</fpage><lpage>38</lpage>
      <history>
        <date date-type="received"><day>25</day><month>July</month><year>2023</year></date>
           <date date-type="rev-request"><day>4</day><month>August</month><year>2023</year></date>
           <date date-type="rev-recd"><day>20</day><month>October</month><year>2023</year></date>
           <date date-type="accepted"><day>27</day><month>November</month><year>2023</year></date>
      </history>
      <permissions>
        <copyright-statement>Copyright: © 2024 </copyright-statement>
        <copyright-year>2024</copyright-year>
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://se.copernicus.org/articles/.html">This article is available from https://se.copernicus.org/articles/.html</self-uri><self-uri xlink:href="https://se.copernicus.org/articles/.pdf">The full text article is available as a PDF file from https://se.copernicus.org/articles/.pdf</self-uri>
      <abstract><title>Abstract</title>

      <p id="d1e127">Fluid and melt transport in the solid mantle can be modeled as a two-phase flow in which the liquid flow is resisted by the compaction of the viscously deforming solid mantle. Given the wide impact of liquid transport on the geodynamical and geochemical evolution of the Earth, the so-called “compaction equations” are increasingly being incorporated into geodynamical modeling studies. When implementing these equations, it is common to use a regularization technique to handle the porosity singularity in the dry mantle. Moreover, it is also common to enforce a positive porosity (liquid fraction) to avoid unphysical negative values of porosity. However, the effects of this “capped” porosity on the liquid flow and mass conservation have not been quantitatively evaluated. Here, we investigate these effects using a series of 1- and 2-dimensional numerical models implemented using the commercial finite-element package COMSOL Multiphysics<sup>®</sup>. The results of benchmarking experiments against a semi-analytical solution for 1- and 2-D solitary waves illustrate the successful implementation of the compaction equations. We show that the solutions are accurate when the element size is smaller than half of the compaction length. Furthermore, in time-evolving experiments where the solid is stationary (immobile), we show that the mass balance errors are similarly low for both the capped and uncapped (i.e., allowing negative porosity) experiments. When Couette flow, convective flow, or subduction corner flow of the solid mantle is assumed, the capped porosity leads to overestimations of the mass of liquid in the model domain and the mass flux of liquid across the model boundaries, resulting in intrinsic errors in mass conservation even if a high mesh resolution is used. Despite the errors in mass balance, however, the distributions of the positive porosity and peaks (largest positive liquid fractions) in both the uncapped and capped experiments are similar. Hence, the capping of porosity in the compaction equations can be reasonably used to assess the main pathways and first-order distribution of fluids and melts in the mantle.</p>
  </abstract>
    
<funding-group>
<award-group id="gs1">
<funding-source>National Research Foundation of Korea</funding-source>
<award-id>2022R1A2C1004592</award-id>
</award-group>
</funding-group>
</article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <label>1</label><title>Introduction</title>
      <p id="d1e142">The fluid and melt within the Earth's mantle, as well as their transport from depth to surface, play a key role in the geodynamical and geochemical evolution of our planet. At depth, the presence of small fluid and melt fractions (up to 1 %–10 %) affects the bulk physical properties of mantle rocks (Mei et al., 2002; Zimmerman and Kohlstedt, 2004; Dohmen and Schmeling, 2021). This effect partly influences the vigor of mantle convection (e.g., Ogawa and Nakamura, 1998) and potentially assists the localization of deformations (Holtzman et al., 2003; Zimmerman and Kohlstedt, 2004; Katz et al., 2006) and may thus be a key ingredient for the functioning of plate tectonics. At the depths at which they are generated and through their journey to the surface, fluid and<?pagebreak page24?> melt extract incompatible and fluid-mobile elements from the mantle rocks, thereby controlling planetary differentiation and contributing to the growth of the continental crust (Gerya and Meilick, 2011; Jagoutz and Kelemen, 2015). The ascent and eruption of magmas lead to the formation of volcanoes over and between tectonic plates, linking the evolution of the solid Earth to the evolution of the atmosphere (Lopez et al., 2023).</p>
      <p id="d1e145">Because of the wide impact that fluid and melt have on the Earth system, it is crucial to constrain their migration pathways and spatial distribution. These can be inferred on the basis of geophysical imaging (e.g., magnetotellurics and seismic tomography). However, such methods lead to interpretations that are often non-unique given the dependence of the observables on multiple factors. Further, they are only present-day static images of a dynamic process. Forward modeling of liquid transport is a tool that can help to quantify the fluid and melt migration and their spatial distribution in the mantle and to study the coupled fluid/melt-mantle dynamics at a geodynamic scale (from 1 to 100s of kilometers).</p>
      <p id="d1e148">One of the pioneering studies on liquid (aqueous fluid and melt) transport in the solid Earth was that of McKenzie (1984) (see also Scott and Stevenson, 1984; Fowler, 1985), who derived a two-phase flow theory based on continuum mechanics for a liquid in a viscously deforming porous solid matrix (mantle rocks). In this theory, a buoyant liquid phase percolates through the solid phase, where the liquid viscosity is many orders of magnitude lower than that of the permeable mantle matrix. The liquid flow follows Darcy's law but experiences resistance due to the compaction of the solid matrix. Using this theory, liquid flow was evaluated in various geodynamic settings, including mid-ocean ridges (Katz, 2008; Keller and Katz, 2016; Cerpa et al., 2018; Sim et al., 2020; Pusok et al., 2022), subduction zones (Dymkova and Gerya, 2013; Wilson et al., 2014; Cerpa et al., 2017, 2018; Rees Jones et al., 2018; Wang et al., 2019), continental rifts (Schmeling, 2010; Li et al., 2023), and an intraplate context (Keller et al., 2013; Dannberg and Heister, 2016).</p>
      <p id="d1e151">The mantle away from the vicinity of the plate boundaries is generally thought to be relatively dry except in the specific regions where the presence of volatiles and melts has been suggested, e.g., in the shallow asthenospheric mantle (Chantel et al., 2016; Cerpa et al., 2019; Debayle et al., 2020) and near the 410 and 660 km discontinuities (Bercovici and Karato, 2003). However, in the application of the two-phase flow equations to the mantle, the near-zero porosity limit leads to a singularity, and it is therefore difficult to handle numerically (Arbogast et al., 2017; Dannberg et al., 2019). Thus, the equations are commonly regularized by imposing a small porosity across the entire model domain (e.g., Wilson et al., 2014; Cerpa et al., 2017). Along with an assumption of small porosity, it is also necessary to “cap” the porosity field to avoid the development of negative porosity values, which naturally arises from the governing equations. However, despite the widespread use of a capped porosity in numerical models, its impacts on the liquid flow and mass conservation have not been quantitatively evaluated.</p>
      <p id="d1e155">In the present study, we investigate the effect of regularization with the capped porosity on the liquid flow and mass conservation in the two-phase flow model for the Earth's mantle using the commercial finite-element package COMSOL Multiphysics<sup>®</sup> (COMSOL hereafter). COMSOL was used previously in the context of mantle convection and successfully benchmarked (e.g., Lee, 2013; Yu and Lee, 2018; Trim et al., 2021). For example, it was used to study the liquid transport in the mantle wedges of subduction zones when considering a simplified porous flow model that did not incorporate the effect of matrix compaction (e.g., Wada and Behn, 2015; Lee et al., 2021; Lee and Kim, 2021). It was also used to investigate compaction-driven segregation of porosity in shear bands (Butler, 2017). Here, we implement the governing equations that account for the compaction of the mantle matrix in COMSOL and validate the implementation by benchmarking the model solution against a semi-analytical solution for 1- and 2-dimensional (1- and 2-D) solitary waves. We then evaluate the effects of a capped porosity on liquid flow and mass conservation by comparing the mass balance between the capped and uncapped experiments using four different flow fields for the solid matrix: stagnant, Couette flow, convective flow, and subduction corner flow. One of the advantages of COMSOL is that it has the potential to perform coupling between different physics. Thus, the results of the present study can provide the basis for future applications of COMSOL for coupling the two-phase flow equations with other solid Earth processes, such as chemical reactions and heat transfer by liquids.</p>
</sec>
<sec id="Ch1.S2">
  <label>2</label><title>Governing equations</title>
      <p id="d1e169">We follow the reformulation of the physics of two-phase flow in the mantle in which only the solid-state mantle flow (solid flow) influences the porous flow (i.e., one-way coupling) under the small-porosity approximation (e.g., Spiegelman, 1993; Katz et al., 2007; Katz, 2022). Such a formulation has been described in detail for previous studies which provided the derivation of the non-dimensionalized governing equations for the solid and liquid flow (Wilson et al., 2014; Cerpa et al., 2017). Below, we briefly describe the equations.</p>
      <p id="d1e172">The governing equations for solid flow are the non-dimensionalized incompressible Stokes equations and the heat equation in a non-dimensionalized form (Wilson et al., 2014; Cerpa et al., 2017; Lee et al., 2021):</p>
      <?pagebreak page25?><p id="d1e175"><disp-formula specific-use="gather" content-type="numbered"><mml:math id="M1" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="Ch1.E1"><mml:mtd><mml:mtext>1</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mi mathvariant="normal">∇</mml:mi><mml:mo>⋅</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">v</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E2"><mml:mtd><mml:mtext>2</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mi mathvariant="normal">∇</mml:mi><mml:mo>⋅</mml:mo><mml:mfenced open="(" close=")"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">η</mml:mi><mml:mover accent="true"><mml:mi mathvariant="bold-italic">ϵ</mml:mi><mml:mo mathvariant="normal">˙</mml:mo></mml:mover></mml:mrow></mml:mfenced><mml:mo>-</mml:mo><mml:mi mathvariant="normal">∇</mml:mi><mml:mi>p</mml:mi><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msubsup><mml:mi>h</mml:mi><mml:mn mathvariant="normal">0</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mrow><mml:msub><mml:mi mathvariant="normal">s</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:msub><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>T</mml:mi><mml:msub><mml:mi>g</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi mathvariant="italic">η</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:msub><mml:mi>v</mml:mi><mml:mrow><mml:msub><mml:mi mathvariant="normal">s</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mi>T</mml:mi><mml:msub><mml:mi mathvariant="bold-italic">k</mml:mi><mml:mi mathvariant="normal">up</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E3"><mml:mtd><mml:mtext>3</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi>T</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">v</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub><mml:mo>⋅</mml:mo><mml:mi mathvariant="normal">∇</mml:mi><mml:mi>T</mml:mi><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:mi>P</mml:mi><mml:mi>e</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:msup><mml:mi mathvariant="normal">∇</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mi>T</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

          <?xmltex \hack{\newpage}?><?xmltex \hack{\noindent}?>where <inline-formula><mml:math id="M2" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold-italic">v</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is the solid velocity, <inline-formula><mml:math id="M3" display="inline"><mml:mi mathvariant="italic">η</mml:mi></mml:math></inline-formula> is the solid shear viscosity, <inline-formula><mml:math id="M4" display="inline"><mml:mover accent="true"><mml:mi mathvariant="bold-italic">ϵ</mml:mi><mml:mo mathvariant="normal">˙</mml:mo></mml:mover></mml:math></inline-formula> is strain rate tensor, <inline-formula><mml:math id="M5" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> is the dynamic pressure, <inline-formula><mml:math id="M6" display="inline"><mml:mrow><mml:msub><mml:mi>h</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is the reference length, <inline-formula><mml:math id="M7" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mrow><mml:msub><mml:mi mathvariant="normal">s</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> is the reference solid density, <inline-formula><mml:math id="M8" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is the thermal expansivity, <inline-formula><mml:math id="M9" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>T</mml:mi></mml:mrow></mml:math></inline-formula> is the temperature difference, <inline-formula><mml:math id="M10" display="inline"><mml:mrow><mml:msub><mml:mi>g</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is the gravitational acceleration, <inline-formula><mml:math id="M11" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">η</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is the reference solid shear viscosity, <inline-formula><mml:math id="M12" display="inline"><mml:mrow><mml:msub><mml:mi>v</mml:mi><mml:mrow><mml:msub><mml:mi mathvariant="normal">s</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> is a reference solid velocity, <inline-formula><mml:math id="M13" display="inline"><mml:mi>T</mml:mi></mml:math></inline-formula> is the temperature, <inline-formula><mml:math id="M14" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="bold-italic">k</mml:mi><mml:mi mathvariant="normal">up</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is the unit vector in the direction opposite to gravity, and <italic>Pe</italic> is the Peclet number (<inline-formula><mml:math id="M15" display="inline"><mml:mrow><mml:msub><mml:mi>h</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:msub><mml:mi>v</mml:mi><mml:mrow><mml:msub><mml:mi mathvariant="normal">s</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:msub><mml:mo>/</mml:mo><mml:msub><mml:mi mathvariant="italic">κ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, where <inline-formula><mml:math id="M16" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">κ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is the thermal diffusivity). In the heat equation, we neglect radiogenic heating and latent heat.</p>
      <p id="d1e532">In what follows, we neglect the effect of the gradients of dynamic pressure term on the fluid flow since they are expected to be negligibly small compared to those of the compaction pressure in most of the regions of the convective mantle which we focus on (see discussion in Cerpa et al., 2017). Given this assumption, the non-dimensionalized governing equations for liquid flow are

              <disp-formula specific-use="gather" content-type="numbered"><mml:math id="M17" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="Ch1.E4"><mml:mtd><mml:mtext>4</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>∂</mml:mo><mml:mi mathvariant="italic">ϕ</mml:mi></mml:mrow><mml:mrow><mml:mo>∂</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">v</mml:mi><mml:mi>s</mml:mi></mml:msub><mml:mo>⋅</mml:mo><mml:mi mathvariant="normal">∇</mml:mi><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mo>-</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>v</mml:mi><mml:mrow><mml:msub><mml:mi>l</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi>v</mml:mi><mml:mrow><mml:msub><mml:mi mathvariant="normal">s</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msubsup><mml:mi>h</mml:mi><mml:mn mathvariant="normal">0</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow><mml:mrow><mml:msubsup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">0</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:mfrac></mml:mstyle><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi mathvariant="script">P</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/></mml:mrow><mml:mi mathvariant="italic">ζ</mml:mi></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mi mathvariant="normal">Γ</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E5"><mml:mtd><mml:mtext>5</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msubsup><mml:mi>h</mml:mi><mml:mn mathvariant="normal">0</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow><mml:mrow><mml:msubsup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">0</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:mfrac></mml:mstyle><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi mathvariant="script">P</mml:mi><mml:mi mathvariant="italic">ζ</mml:mi></mml:mfrac></mml:mstyle><mml:mo>-</mml:mo><mml:mi mathvariant="normal">∇</mml:mi><mml:mo>⋅</mml:mo><mml:mfenced open="[" close="]"><mml:mrow><mml:mi>K</mml:mi><mml:mfenced close=")" open="("><mml:mrow><mml:mi mathvariant="normal">∇</mml:mi><mml:mi mathvariant="script">P</mml:mi><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="bold-italic">k</mml:mi><mml:mi mathvariant="normal">up</mml:mi></mml:msub></mml:mrow></mml:mfenced></mml:mrow></mml:mfenced><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>v</mml:mi><mml:mrow><mml:msub><mml:mi mathvariant="normal">s</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi>v</mml:mi><mml:mrow><mml:msub><mml:mi>l</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="italic">ρ</mml:mi></mml:mrow><mml:mrow><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mrow><mml:msub><mml:mi>l</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mi mathvariant="normal">Γ</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

          where <inline-formula><mml:math id="M18" display="inline"><mml:mi mathvariant="italic">ϕ</mml:mi></mml:math></inline-formula> is the porosity, <inline-formula><mml:math id="M19" display="inline"><mml:mi mathvariant="script">P</mml:mi></mml:math></inline-formula> is the compaction pressure, <inline-formula><mml:math id="M20" display="inline"><mml:mi mathvariant="italic">ζ</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M21" display="inline"><mml:mi>K</mml:mi></mml:math></inline-formula> are the bulk viscosity and permeability, respectively, and <inline-formula><mml:math id="M22" display="inline"><mml:mi mathvariant="normal">Γ</mml:mi></mml:math></inline-formula> is the rate of mass transfer between the solid and liquid phases. The density contrast between the solid and liquid phases is denoted as <inline-formula><mml:math id="M23" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="italic">ρ</mml:mi><mml:mo>=</mml:mo><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mrow><mml:msub><mml:mi mathvariant="normal">s</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mrow><mml:msub><mml:mi>l</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> (e.g., Wilson et al., 2014; Cerpa et al., 2017).</p>
      <p id="d1e796">The reference compaction length <inline-formula><mml:math id="M24" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is given by</p>
      <p id="d1e810"><disp-formula id="Ch1.E6" content-type="numbered"><label>6</label><mml:math id="M25" display="block"><mml:mrow><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>=</mml:mo><mml:msqrt><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:msubsup><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mn mathvariant="normal">0</mml:mn><mml:mrow><mml:mi>n</mml:mi><mml:mo>-</mml:mo><mml:mi>m</mml:mi></mml:mrow></mml:msubsup><mml:msub><mml:mi mathvariant="italic">η</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:msqrt><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
        where <inline-formula><mml:math id="M26" display="inline"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is the reference liquid mobility (defined as the ratio of a reference permeability to a reference liquid viscosity), <inline-formula><mml:math id="M27" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is the reference porosity, <inline-formula><mml:math id="M28" display="inline"><mml:mi>n</mml:mi></mml:math></inline-formula> is the permeability exponent, and <inline-formula><mml:math id="M29" display="inline"><mml:mi>m</mml:mi></mml:math></inline-formula> is the bulk viscosity exponent (Spiegelman, 1993). The reference liquid velocity <inline-formula><mml:math id="M30" display="inline"><mml:mrow><mml:msub><mml:mi>v</mml:mi><mml:mrow><mml:msub><mml:mi>l</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> is defined as</p>
      <p id="d1e903"><disp-formula id="Ch1.E7" content-type="numbered"><label>7</label><mml:math id="M31" display="block"><mml:mrow><mml:msub><mml:mi>v</mml:mi><mml:mrow><mml:msub><mml:mi>l</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mi>K</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:msubsup><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mn mathvariant="normal">0</mml:mn><mml:mrow><mml:mi>n</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="italic">ρ</mml:mi><mml:msub><mml:mi>g</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula></p>
      <p id="d1e950">The non-dimensional bulk viscosity <inline-formula><mml:math id="M32" display="inline"><mml:mi mathvariant="italic">ζ</mml:mi></mml:math></inline-formula>, the permeability <inline-formula><mml:math id="M33" display="inline"><mml:mi>K</mml:mi></mml:math></inline-formula>, and the compaction length <inline-formula><mml:math id="M34" display="inline"><mml:mi mathvariant="italic">δ</mml:mi></mml:math></inline-formula> are, respectively,</p>
      <p id="d1e974"><disp-formula specific-use="gather" content-type="numbered"><mml:math id="M35" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="Ch1.E8"><mml:mtd><mml:mtext>8</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mi mathvariant="italic">ζ</mml:mi><mml:mo>=</mml:mo><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi mathvariant="italic">η</mml:mi><mml:mrow><mml:msup><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mi>m</mml:mi></mml:msup></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E9"><mml:mtd><mml:mtext>9</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi>K</mml:mi><mml:mo>=</mml:mo><mml:msup><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mi>n</mml:mi></mml:msup><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E10"><mml:mtd><mml:mtext>10</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi mathvariant="italic">δ</mml:mi><mml:mo>=</mml:mo><mml:msqrt><mml:mrow><mml:msup><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mrow><mml:mi>n</mml:mi><mml:mo>-</mml:mo><mml:mi>m</mml:mi></mml:mrow></mml:msup><mml:mi mathvariant="italic">η</mml:mi></mml:mrow></mml:msqrt><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula></p>
      <p id="d1e1050">Given the relationships shown in Eqs. (8) and (9), Eqs. (4) and (5) become singular if <inline-formula><mml:math id="M36" display="inline"><mml:mrow><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mo>→</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula>. In most geodynamic applications, the initial porosity field is close to zero away from the liquid pathways, so various approaches are employed to prevent a singularity (e.g., Wilson et al., 2014; Butler, 2017; Sim et al., 2020). Here, we use a regularized bulk viscosity and a regularized permeability defined as follows: <inline-formula><mml:math id="M37" display="inline"><mml:mrow><mml:mover accent="true"><mml:mi mathvariant="italic">ζ</mml:mi><mml:mo stretchy="false" mathvariant="normal">̃</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mi mathvariant="italic">η</mml:mi><mml:mrow><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mi mathvariant="italic">ϵ</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M38" display="inline"><mml:mrow><mml:mover accent="true"><mml:mi>K</mml:mi><mml:mo mathvariant="normal" stretchy="false">̃</mml:mo></mml:mover><mml:mo>=</mml:mo><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mi mathvariant="italic">ϵ</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mi>n</mml:mi></mml:msup></mml:mrow></mml:math></inline-formula>, where <inline-formula><mml:math id="M39" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mi mathvariant="italic">ϵ</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is a user-defined “small” porosity which can be chosen based on the choice of a minimum compaction length <inline-formula><mml:math id="M40" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mi mathvariant="italic">ϵ</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> that presents the relationship <inline-formula><mml:math id="M41" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mi mathvariant="italic">ϵ</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:msubsup><mml:mi mathvariant="italic">δ</mml:mi><mml:mi mathvariant="italic">ϵ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>/</mml:mo><mml:mi mathvariant="italic">η</mml:mi></mml:mrow></mml:mfenced><mml:mfrac><mml:mn mathvariant="normal">1</mml:mn><mml:mrow><mml:mi>n</mml:mi><mml:mo>-</mml:mo><mml:mi>m</mml:mi></mml:mrow></mml:mfrac></mml:msup></mml:mrow></mml:math></inline-formula> (Wilson et al., 2014; Cerpa et al., 2017, 2018). Note that the regularized permeability is only applied to the term related to the gradients of the compaction pressure in Eq. (5). Finally, a negative porosity (<inline-formula><mml:math id="M42" display="inline"><mml:mrow><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mi mathvariant="italic">&lt;</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula>) is physically unrealistic and thus a non-negative porosity field is commonly imposed as a constraint when solving the equations (e.g., Wilson et al., 2014; Cerpa et al., 2017, 2018). To evaluate the impact of such a treatment of the porosity field on liquid flow and mass conservation, we perform experiments with and without an enforced positive porosity (i.e., imposing <inline-formula><mml:math id="M43" display="inline"><mml:mrow><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> max (0, <inline-formula><mml:math id="M44" display="inline"><mml:mi mathvariant="italic">ϕ</mml:mi></mml:math></inline-formula>)). Hereafter, these experiments are referred to as “capped” and “uncapped” experiments, respectively.</p>
      <p id="d1e1210">For the Stokes equations (Eqs. 1 and 2), we use the Creeping Flow (CF) module in COMSOL with quadratic and linear elements for the velocity and pressure, respectively. For the heat equation (Eq. 3), we use the Heat Transfer in Fluids (HT) module with quadratic and continuous Galerkin finite elements. The standard stabilization methods for the streamline and crosswind diffusions are used for both the CF and HT modules. To solve the time-dependent equations (Eqs. 1–3), we use the generalized-alpha method, adopting second-order accuracy of time integration with the direct, fully coupled PARDISO solver.</p>
      <p id="d1e1213">Equation (4) is solved using the Transport of Diluted Species (TDS) module with the stabilization method for the streamline diffusion. Equation (5) is solved using the TDS module for a benchmarking experiment against a semi-analytical solution for 1- and 2-D solitary waves (Sect. 3), and the generalized Coefficient Form of PDE (CFPDE) module is used for all the other experiments (Sect. 4) because the CFPDE module is more flexible with the boundary conditions that can be applied (e.g., the Weak Contribution option). We applied the CFPDE module to solve Eq. (5) to test its consistency with the TDS module, and the porosity differences were found to be smaller than 10<inline-formula><mml:math id="M45" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">9</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (models not shown). We use the quadratic and continuous Galerkin finite elements for the spatial discretization of Eqs. (4) and (5). To solve the equations, the generalized-alpha method with second-order accuracy of time integration and the direct segregated PARDISO solver are used. The Jacobian is updated every time step. The Lower Limit option in the segregated solver in COMSOL is used to cap the porosity (<inline-formula><mml:math id="M46" display="inline"><mml:mrow><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> max (0, <inline-formula><mml:math id="M47" display="inline"><mml:mi mathvariant="italic">ϕ</mml:mi></mml:math></inline-formula>)).</p>
</sec>
<?pagebreak page26?><sec id="Ch1.S3">
  <label>3</label><title>Benchmarking implementation against a semi-analytical solution for solitary waves</title>
<sec id="Ch1.S3.SS1">
  <label>3.1</label><title>Model setup</title>
      <p id="d1e1261">Simpson and Spiegelman (2011) derived a semi-analytical solution for a solitary wave which travels in the direction opposite to gravity (upward) at a fixed speed (<inline-formula><mml:math id="M48" display="inline"><mml:mi>c</mml:mi></mml:math></inline-formula>) without changing its shape. The solitary wave is kept stationary under an enforced downward solid velocity of <inline-formula><mml:math id="M49" display="inline"><mml:mi>c</mml:mi></mml:math></inline-formula>. We first benchmark our implementation of the equations against the semi-analytical solution for 1- and 2-D solitary waves. This benchmark allows us to verify the successful implementation of the equations in the steady-state limit before conducting time-evolving model experiments for which no analytical solution exists.</p>
      <p id="d1e1278">The governing equations for the solitary waves are as shown in Eqs. (4) and (5) with <inline-formula><mml:math id="M50" display="inline"><mml:mrow><mml:mi mathvariant="normal">Γ</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula>. As in Simpson and Spiegelman (2011), we use <inline-formula><mml:math id="M51" display="inline"><mml:mrow><mml:msub><mml:mi>v</mml:mi><mml:mrow><mml:msub><mml:mi mathvariant="normal">s</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mi>v</mml:mi><mml:mrow><mml:msub><mml:mi>l</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M52" display="inline"><mml:mrow><mml:mstyle displaystyle="false"><mml:mfrac style="text"><mml:mrow><mml:msubsup><mml:mi>h</mml:mi><mml:mn mathvariant="normal">0</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow><mml:mrow><mml:msubsup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">0</mml:mn><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mn mathvariant="normal">4096</mml:mn></mml:mrow></mml:math></inline-formula> in both equations. The latter is based on a domain height that is 64 times the compaction length and is large enough to resolve the solitary waves without significant boundary effects. A structured mesh consisting of square elements is used to discretize the model domain. A pseudo-1-D model domain has a non-dimensionalized height of 1 and a width of two square element sizes, and the 2-D model domain is a square with a non-dimensionalized length of 1 in both dimensions. To solve the compaction pressure accurately, three or more nodes per compaction length should be used (Dohmen and Schmeling, 2021). We use an element size that is a quarter of the compaction length (i.e., <inline-formula><mml:math id="M53" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>/</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:math></inline-formula>) unless otherwise stated. This is equivalent to a non-dimensionalized length of <inline-formula><mml:math id="M54" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>/</mml:mo><mml:mn mathvariant="normal">256</mml:mn></mml:mrow></mml:math></inline-formula>, which provides 9 nodes per compaction length and 513 nodes over the domain height. Since the initial non-dimensionalized porosity field is sufficiently large throughout the model domain (<inline-formula><mml:math id="M55" display="inline"><mml:mo lspace="0mm">≥</mml:mo></mml:math></inline-formula>1), we set <inline-formula><mml:math id="M56" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mi mathvariant="italic">ϵ</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> to 0 (i.e., no regularization). We prescribe unit non-dimensionalized porosity (<inline-formula><mml:math id="M57" display="inline"><mml:mrow><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula>) and zero compaction pressure (<inline-formula><mml:math id="M58" display="inline"><mml:mrow><mml:mi mathvariant="script">P</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula>) at the top boundary as well as zero porosity gradient (<inline-formula><mml:math id="M59" display="inline"><mml:mrow><mml:mi mathvariant="normal">∇</mml:mi><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mo>⋅</mml:mo><mml:mi>n</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula>) and zero gradient of the compaction pressure (<inline-formula><mml:math id="M60" display="inline"><mml:mrow><mml:mi mathvariant="normal">∇</mml:mi><mml:mi mathvariant="script">P</mml:mi><mml:mo>⋅</mml:mo><mml:mi>n</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula>) at the other boundaries.</p>
      <p id="d1e1453">The semi-analytic solution for a solitary wave defined for a particular choice of the triplet (<inline-formula><mml:math id="M61" display="inline"><mml:mi>c</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M62" display="inline"><mml:mi>n</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M63" display="inline"><mml:mi>m</mml:mi></mml:math></inline-formula>), where <inline-formula><mml:math id="M64" display="inline"><mml:mi>c</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M65" display="inline"><mml:mi>n</mml:mi></mml:math></inline-formula>, and <inline-formula><mml:math id="M66" display="inline"><mml:mi>m</mml:mi></mml:math></inline-formula> represent the non-dimensionalized speed of the solitary wave, the permeability exponent, and the bulk viscosity exponent, respectively, is imposed as an initial porosity field (e.g., Fig. 1b). We calculate the initial solution using the Python codes provided in the cookbook (TerraFERMA Cookbook; <uri>https://doi.org/10.6084/m9.figshare.1466786.v4</uri>, last access: 12 January 2024) of the open-source finite-element code TerraFERMA (Wilson et al., 2017). For accuracy, the solution is calculated at 513 evenly distributed nodes over the domain height, and the peak porosity is placed at the center of the model domain. Thus, all the nodes of the 1-D model have the exact values of the solution. For the nodes of the 2-D model domain, the solution is calculated at the nodes along the horizontal and vertical lines that pass through the center of the model domain, and the initial values at the other nodes are approximated by using a cubic spline interpolation. The solutions described on the model domain show hump- and cone-like shapes for one and two dimensions, respectively. Note that the initial compaction pressure is zero across the entire domain. Finally, a constant non-dimensionalized time step is set using a Courant number of 0.5 for the solid velocity, which in this case is identical to the velocity of the solitary wave. We run the model until a non-dimensionalized time of 0.5. In what follows, until stated otherwise, we provide non-dimensional parameter values (porosity, compaction pressure, time, etc.).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1" specific-use="star"><?xmltex \currentcnt{1}?><?xmltex \def\figurename{Figure}?><label>Figure 1</label><caption><p id="d1e1505"><bold>(a)</bold> Model boundary conditions used for both the 1- and 2-D experiments. <bold>(b)</bold> Initial porosity from the 2-D experiment when the triplet (<italic>5</italic>, <italic>3</italic>, <italic>1</italic>) is chosen.</p></caption>
          <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://se.copernicus.org/articles/15/23/2024/se-15-23-2024-f01.png"/>

        </fig>

</sec>
<sec id="Ch1.S3.SS2">
  <label>3.2</label><title>Benchmarking results</title>
      <p id="d1e1536">To quantify the growing error in the solitary wave with time, we calculate the phase shift and phase error of the wave relative to the semi-analytical solution along the vertical line that passes through the center of the model domain (e.g., Simpson and Spiegelman, 2011). The phase shift is estimated by tracking the location of the peak porosity value of the solitary wave relative to the central node (at a distance of 0.5) by fitting a second-order polynomial to the values at the central node and the nodes above and below it. The calculation of the phase error consists of two steps. First, the calculated porosity values at the nodes are interpolated using a piecewise cubic spline to obtain the waveform; then, the waveform is migrated back by the phase shift and the phase error is calculated over the nodes as follows:</p>
      <p id="d1e1539"><disp-formula id="Ch1.E11" content-type="numbered"><label>11</label><mml:math id="M67" display="block"><mml:mrow><mml:msqrt><mml:mrow><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mrow><mml:mi>k</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>l</mml:mi></mml:munderover><mml:msup><mml:mfenced close=")" open="("><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi mathvariant="normal">∅</mml:mi><mml:mrow><mml:mi mathvariant="normal">calc</mml:mi><mml:mo>,</mml:mo><mml:mi>k</mml:mi></mml:mrow></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="normal">∅</mml:mi><mml:mrow><mml:mi mathvariant="normal">anal</mml:mi><mml:mo>,</mml:mo><mml:mi>k</mml:mi></mml:mrow></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi mathvariant="normal">∅</mml:mi><mml:mrow><mml:mi mathvariant="normal">anal</mml:mi><mml:mo>,</mml:mo><mml:mi>k</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:msqrt><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
          where <inline-formula><mml:math id="M68" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">∅</mml:mi><mml:mrow><mml:mi mathvariant="normal">calc</mml:mi><mml:mo>,</mml:mo><mml:mi>k</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> is the value of the migrated waveform at the <inline-formula><mml:math id="M69" display="inline"><mml:mi>k</mml:mi></mml:math></inline-formula>th node, <inline-formula><mml:math id="M70" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">∅</mml:mi><mml:mrow><mml:mi mathvariant="normal">anal</mml:mi><mml:mo>,</mml:mo><mml:mi>k</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> is the corresponding value of the semi-analytical solution at the <inline-formula><mml:math id="M71" display="inline"><mml:mi>k</mml:mi></mml:math></inline-formula>th node, and <inline-formula><mml:math id="M72" display="inline"><mml:mi>l</mml:mi></mml:math></inline-formula> is the total number of nodes.</p>
<sec id="Ch1.S3.SS2.SSS1">
  <label>3.2.1</label><?xmltex \opttitle{Effect of the choice of the triplet ($c$, $n$, $m$)}?><title>Effect of the choice of the triplet (<inline-formula><mml:math id="M73" display="inline"><mml:mi>c</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M74" display="inline"><mml:mi>n</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M75" display="inline"><mml:mi>m</mml:mi></mml:math></inline-formula>)</title>
      <?pagebreak page27?><p id="d1e1685">We benchmark the model solutions using three solitary wave solutions for different choices of the triplet (<inline-formula><mml:math id="M76" display="inline"><mml:mi>c</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M77" display="inline"><mml:mi>n</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M78" display="inline"><mml:mi>m</mml:mi></mml:math></inline-formula>): (<italic>4</italic>, <italic>2</italic>, <italic>1</italic>), (<italic>5</italic>, <italic>3</italic>, <italic>1</italic>), and (<italic>7</italic>, <italic>3</italic>, <italic>1</italic>). All the experiments show that the solitary wave undergoes a sudden downward migration after the first time step, yielding a negative phase shift on the order of <inline-formula><mml:math id="M79" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mo>-</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">7</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> (Fig. 2a) owing to the initial zero compaction pressure distribution. Then, it slowly migrates upwards with time. The experiments with the triplet (<italic>7</italic>, <italic>3</italic>, <italic>1</italic>) show the largest phase shifts: <inline-formula><mml:math id="M80" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">4.4</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">7</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M81" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">6.2</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">7</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> for the 1- and 2-D experiments at a model time of 0.5, respectively; the phase shifts of the other experiments with triplets of (<italic>4</italic>, <italic>2</italic>, <italic>1</italic>) and (<italic>5</italic>, <italic>3</italic>, <italic>1</italic>) are smaller than 10<inline-formula><mml:math id="M82" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">6</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> after a model time of 0.5. As observed in the phase shift, a sudden large phase error occurs after the first time step (on the order of 10<inline-formula><mml:math id="M83" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">6</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> or smaller) and linearly increases with time (Fig. 2b). The linear increase in the phase error is likely due to numerical diffusion of the porosity field, which tends to smooth out the solitary wave.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2" specific-use="star"><?xmltex \currentcnt{2}?><?xmltex \def\figurename{Figure}?><label>Figure 2</label><caption><p id="d1e1851"><bold>(a, b)</bold> Time evolutions of the phase shifts and phase errors for the solitary waves calculated for three choices of the triplet (<inline-formula><mml:math id="M84" display="inline"><mml:mi>c</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M85" display="inline"><mml:mi>n</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M86" display="inline"><mml:mi>m</mml:mi></mml:math></inline-formula>) in the 1- and 2-D experiments. <bold>(c, d)</bold> Absolute net phase shifts and phase errors of the solitary waves calculated with the triplet (<italic>5</italic>, <italic>3</italic>, <italic>1</italic>) for element sizes of <inline-formula><mml:math id="M87" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M88" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>/</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M89" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>/</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M90" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>/</mml:mo><mml:mn mathvariant="normal">8</mml:mn></mml:mrow></mml:math></inline-formula> in the 1- and 2-D experiments. These were calculated over a model time period of 0.4 (from a model time of 0.1 to 0.5).</p></caption>
            <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://se.copernicus.org/articles/15/23/2024/se-15-23-2024-f02.png"/>

          </fig>

</sec>
<sec id="Ch1.S3.SS2.SSS2">
  <label>3.2.2</label><title>Effect of the element size</title>
      <p id="d1e1960">We evaluate the effect of the element size on the solitary waves with the triplet (<italic>5</italic>, <italic>3</italic>, <italic>1</italic>). In addition to the reference experiment with an element size of <inline-formula><mml:math id="M91" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>/</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:math></inline-formula> mentioned above, we consider element sizes of <inline-formula><mml:math id="M92" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M93" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>/</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M94" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>/</mml:mo><mml:mn mathvariant="normal">8</mml:mn></mml:mrow></mml:math></inline-formula> (lengths of <inline-formula><mml:math id="M95" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>/</mml:mo><mml:mn mathvariant="normal">64</mml:mn></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M96" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>/</mml:mo><mml:mn mathvariant="normal">128</mml:mn></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M97" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>/</mml:mo><mml:mn mathvariant="normal">512</mml:mn></mml:mrow></mml:math></inline-formula>, respectively). All other model parameters are the same as in the reference experiment.</p>
      <p id="d1e2065">The 1-D experiment using an element size of <inline-formula><mml:math id="M98" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and both the 1- and 2-D experiments using an element size of <inline-formula><mml:math id="M99" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>/</mml:mo><mml:mn mathvariant="normal">8</mml:mn></mml:mrow></mml:math></inline-formula> show large phase shifts that grow with time (results not shown). This is because, in these experiments, a solitary wave originating from the top boundary passes the model domain toward the bottom boundary, which results in a substantial change in the shape of the existing solitary wave and forces the wave to migrate upward faster than in the other experiments. To minimize this “passing solitary wave” effect in these specific models, we used an initial condition field calculated at the evenly distributed 1025 nodes over the model height instead of 513 nodes. Using such a refined initial condition, the passing solitary wave does not occur in either 1- or 2-D experiments except in the 1-D experiment that uses the coarsest element size of <inline-formula><mml:math id="M100" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>.</p>
      <p id="d1e2105">Overall, with the refined initial condition, the absolute net phase shift is relatively small (<inline-formula><mml:math id="M101" display="inline"><mml:mrow><mml:mo>≤</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">6</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>) for all the element sizes that were tested except for <inline-formula><mml:math id="M102" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, which shows a much larger net phase shift (<inline-formula><mml:math id="M103" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>) for the reason detailed above (Fig. 2c). As in the previous experiments, the phase error slowly grows with time, likely due to numerical diffusion of the porosity field (Fig. 2d). Moreover, an increase in mesh resolution leads to a decrease in the error. These experiments confirm that the higher the mesh resolution we use, the smaller the phase shift and phase error we observe.</p>
      <p id="d1e2151">Although the benchmark experiment is not designed for a specific spatiotemporal scale of geological interest, it is worth noting that the solution remains accurate up to a dimensional time of 0.05 Myr (the dimensional time using the model parameters shown in Table 1). The time-evolving problems described below consider longer timescales relevant to geological applications.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T1" specific-use="star"><?xmltex \currentcnt{1}?><label>Table 1</label><caption><p id="d1e2158">Model parameters.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="3">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Parameter</oasis:entry>
         <oasis:entry colname="col2">Formula</oasis:entry>
         <oasis:entry colname="col3">Value</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Reference length <inline-formula><mml:math id="M104" display="inline"><mml:mrow><mml:msub><mml:mi>h</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> (m)</oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">1000</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Reference solid density <inline-formula><mml:math id="M105" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mrow><mml:msub><mml:mi mathvariant="normal">s</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> (kg m<inline-formula><mml:math id="M106" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">3300</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Thermal expansivity <inline-formula><mml:math id="M107" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">α</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> (K<inline-formula><mml:math id="M108" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M109" display="inline"><mml:mrow><mml:mn mathvariant="normal">2.5</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Temperature difference <inline-formula><mml:math id="M110" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>T</mml:mi></mml:mrow></mml:math></inline-formula> (K)</oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">1000</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Gravitational acceleration <inline-formula><mml:math id="M111" display="inline"><mml:mrow><mml:msub><mml:mi>g</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> (m s<inline-formula><mml:math id="M112" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">10</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Reference solid shear viscosity <inline-formula><mml:math id="M113" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">η</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> (Pa s)</oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M114" display="inline"><mml:mrow><mml:mn mathvariant="normal">2.1543</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mn mathvariant="normal">19</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Reference solid velocity <inline-formula><mml:math id="M115" display="inline"><mml:mrow><mml:msub><mml:mi>v</mml:mi><mml:mrow><mml:msub><mml:mi mathvariant="normal">s</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> (m s<inline-formula><mml:math id="M116" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M117" display="inline"><mml:mrow><mml:mn mathvariant="normal">3.1710</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Unit vector in the direction opposite to gravity <inline-formula><mml:math id="M118" display="inline"><mml:mrow><mml:msub><mml:mi>k</mml:mi><mml:mi mathvariant="normal">up</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">1</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Peclet number <italic>Pe</italic></oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M119" display="inline"><mml:mrow><mml:msub><mml:mi>h</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:msub><mml:mi>v</mml:mi><mml:mrow><mml:msub><mml:mi mathvariant="normal">s</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:msub><mml:mo>/</mml:mo><mml:msub><mml:mi mathvariant="italic">κ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">0.41857</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Thermal diffusivity <inline-formula><mml:math id="M120" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">κ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> (m<inline-formula><mml:math id="M121" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M122" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M123" display="inline"><mml:mrow><mml:mn mathvariant="normal">7.5758</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">7</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Reference liquid velocity <inline-formula><mml:math id="M124" display="inline"><mml:mrow><mml:msub><mml:mi>v</mml:mi><mml:mrow><mml:msub><mml:mi>l</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> (m s<inline-formula><mml:math id="M125" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M126" display="inline"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:msubsup><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mn mathvariant="normal">0</mml:mn><mml:mrow><mml:mi>n</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msubsup><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="italic">ρ</mml:mi><mml:msub><mml:mi>g</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M127" display="inline"><mml:mrow><mml:mn mathvariant="normal">9.2832</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Reference liquid mobility <inline-formula><mml:math id="M128" display="inline"><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> (m<inline-formula><mml:math id="M129" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:math></inline-formula> s kg<inline-formula><mml:math id="M130" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M131" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">8</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Reference porosity <inline-formula><mml:math id="M132" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">0.0021544</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Density contrast <inline-formula><mml:math id="M133" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi mathvariant="italic">ρ</mml:mi></mml:mrow></mml:math></inline-formula> (kg m<inline-formula><mml:math id="M134" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M135" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mrow><mml:msub><mml:mi mathvariant="normal">s</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mrow><mml:msub><mml:mi>l</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">2000</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Reference liquid density <inline-formula><mml:math id="M136" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ρ</mml:mi><mml:mrow><mml:msub><mml:mi>l</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> (kg m<inline-formula><mml:math id="M137" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">1300</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Reference compaction length <inline-formula><mml:math id="M138" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> (m)</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M139" display="inline"><mml:msqrt><mml:mrow><mml:msub><mml:mi>K</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:msubsup><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mn mathvariant="normal">0</mml:mn><mml:mrow><mml:mi>n</mml:mi><mml:mo>-</mml:mo><mml:mi>m</mml:mi></mml:mrow></mml:msubsup><mml:msub><mml:mi mathvariant="italic">η</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:msqrt></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col3">1000</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Permeability exponent <inline-formula><mml:math id="M140" display="inline"><mml:mi>n</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">3</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Bulk viscosity exponent <inline-formula><mml:math id="M141" display="inline"><mml:mi>m</mml:mi></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">1</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Background porosity <inline-formula><mml:math id="M142" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mi mathvariant="normal">b</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">0.0021544</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table><?xmltex \gdef\@currentlabel{1}?></table-wrap>

</sec>
</sec>
</sec>
<sec id="Ch1.S4">
  <label>4</label><title>Effect of a porosity cap in 2-D time-evolving problems</title>
      <p id="d1e2942">Although the benchmarking models described above verify the successful implementation of the compaction equations, the effects of the capped porosity on the liquid flow and mass conservation should be quantitatively evaluated. In the evaluation, we start with the simplest case – where the solid does not flow (a stagnant solid) – and then apply three solid-flow patterns that are applicable to Earth's mantle: Couette flow, convective flow, and subduction corner flow. Although no analytical solution exists for the modeling schemes, the relatively simple flow patterns that are applied in the models allow reasonable quantification of the sensitivity of liquid flow and mass conservation to the use of a capped porosity.</p>
      <p id="d1e2945">To monitor the accuracy of our computations over time, we evaluate the mass balance of the liquid (e.g., Lee et al., 2021). Since we assume a constant liquid density, this is equivalent to evaluating the volume balance of the liquid. The latter evaluation involves two steps. First, we evaluate the accumulated volume of liquid (<inline-formula><mml:math id="M143" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">acc</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) over the model domain by removing the initial total volume of liquid from the calculated total volume of liquid at a given time <inline-formula><mml:math id="M144" display="inline"><mml:mi>t</mml:mi></mml:math></inline-formula>. Second, we evaluate the net volume flux of liquid (<inline-formula><mml:math id="M145" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">flux</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) through the model liquid boundaries over a given time <inline-formula><mml:math id="M146" display="inline"><mml:mi>t</mml:mi></mml:math></inline-formula>. Both evaluations are conducted by assuming a unit thickness of the model domain (i.e., normal to the model domain) (e.g., Lee et al., 2021) as follows:

              <disp-formula specific-use="gather" content-type="numbered"><mml:math id="M147" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="Ch1.E12"><mml:mtd><mml:mtext>12</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">acc</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi>t</mml:mi><mml:mo>)</mml:mo><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mo>=</mml:mo><?xmltex \igopts{height=8.535827pt}?><mml:mstyle background="https://se.copernicus.org/articles/15/23/2024/se-15-23-2024-g01.png"/><mml:mfenced open="(" close=")"><mml:mrow><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mfenced open="(" close=")"><mml:mi>t</mml:mi></mml:mfenced><mml:mo>-</mml:mo><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mfenced open="(" close=")"><mml:mn mathvariant="normal">0</mml:mn></mml:mfenced></mml:mrow></mml:mfenced><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="normal">d</mml:mi><mml:mi>V</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E13"><mml:mtd><mml:mtext>13</mml:mtext></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">flux</mml:mi></mml:msub><mml:mfenced open="(" close=")"><mml:mi>t</mml:mi></mml:mfenced><mml:mo>=</mml:mo><mml:mspace width="0.125em" linebreak="nobreak"/><mml:munderover><mml:mo movablelimits="false">∫</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mi>t</mml:mi></mml:munderover><mml:mfenced open="{" close="}"><mml:mrow><?xmltex \igopts{height=12.80374pt}?><mml:mstyle background="https://se.copernicus.org/articles/15/23/2024/se-15-23-2024-g02.png"/><mml:mfenced close=")" open="("><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>v</mml:mi><mml:mrow><mml:msub><mml:mi>l</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi>v</mml:mi><mml:mrow><mml:msub><mml:mi mathvariant="normal">s</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mfenced open="(" close=")"><mml:mi>t</mml:mi></mml:mfenced><mml:msub><mml:mi mathvariant="bold-italic">v</mml:mi><mml:mi mathvariant="normal">s</mml:mi></mml:msub><mml:mo>+</mml:mo><mml:mi>K</mml:mi><mml:msub><mml:mi mathvariant="bold-italic">k</mml:mi><mml:mi mathvariant="normal">up</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mo>⋅</mml:mo><mml:mi mathvariant="bold-italic">n</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="normal">d</mml:mi><mml:mi>S</mml:mi></mml:mrow></mml:mfenced><mml:mi mathvariant="normal">d</mml:mi><mml:mi>t</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

          where <?xmltex \igopts{height=8.535827pt}?><inline-graphic xlink:href="https://se.copernicus.org/articles/15/23/2024/se-15-23-2024-g01.png"/> is the volume integral over the model domain, while <inline-formula><mml:math id="M148" display="inline"><mml:mrow><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mfenced close=")" open="("><mml:mi>t</mml:mi></mml:mfenced></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M149" display="inline"><mml:mrow><mml:mi mathvariant="italic">ϕ</mml:mi><mml:mfenced close=")" open="("><mml:mn mathvariant="normal">0</mml:mn></mml:mfenced></mml:mrow></mml:math></inline-formula> are the porosity at a certain time <inline-formula><mml:math id="M150" display="inline"><mml:mi>t</mml:mi></mml:math></inline-formula> and at the initial model time <inline-formula><mml:math id="M151" display="inline"><mml:mrow><mml:mi>t</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula>, respectively<?pagebreak page28?>. <?xmltex \igopts{height=8.535827pt}?><inline-graphic xlink:href="https://se.copernicus.org/articles/15/23/2024/se-15-23-2024-g03.png"/> is the surface integral over the model boundaries. Note that positive and negative values of <inline-formula><mml:math id="M152" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">flux</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> in Eq. (13) indicate a net volume outflux and a net volume influx, respectively. We use the trapezoidal rule with a constant time step for the time integration of the net volume flux of liquid.</p>
      <?pagebreak page29?><p id="d1e3186">Theoretically, assuming that the time-integration scheme is accurate, the sum <inline-formula><mml:math id="M153" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">acc</mml:mi></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">flux</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> should be equal to zero. In practice, a numerical error is expected to occur owing to the classical finite-element method itself and numerical integration of the liquid volume. Hence, we evaluate this relative volume-balance error as
          <disp-formula id="Ch1.E14" content-type="numbered"><label>14</label><mml:math id="M154" display="block"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">acc</mml:mi></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">flux</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">acc</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>×</mml:mo><mml:mn mathvariant="normal">100</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mfenced open="(" close=")"><mml:mi mathvariant="italic">%</mml:mi></mml:mfenced><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
        In the subduction corner flow experiment, a liquid source is introduced within the uppermost slab layer. Thus, taking the liquid source into account, the relative volume-balance error is evaluated as
          <disp-formula id="Ch1.E15" content-type="numbered"><label>15</label><mml:math id="M155" display="block"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">acc</mml:mi></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">flux</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">source</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">acc</mml:mi></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>×</mml:mo><mml:mn mathvariant="normal">100</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mfenced close=")" open="("><mml:mi mathvariant="italic">%</mml:mi></mml:mfenced><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
        where <inline-formula><mml:math id="M156" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">source</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is the liquid volume created within the uppermost slab layer over the model time, which is also calculated using the trapezoidal rule with a constant time step.</p>
<sec id="Ch1.S4.SS1">
  <label>4.1</label><title>Liquid flow through a stagnant porous solid</title>
<sec id="Ch1.S4.SS1.SSS1">
  <label>4.1.1</label><title>Model setup</title>
      <p id="d1e3321">Firstly, we consider a 2-D time-evolving problem with a prescribed porosity at the bottom boundary of a square domain (the height and width are 50, equivalent to 50 km in dimensional units) of a stagnant (immobile) porous solid (Fig. 3a). We solve Eqs. (4) and (5) with <inline-formula><mml:math id="M157" display="inline"><mml:mrow><mml:mi mathvariant="normal">Γ</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula> using the model parameters described in Table 1 and the parameters that are specified below.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3" specific-use="star"><?xmltex \currentcnt{3}?><?xmltex \def\figurename{Figure}?><label>Figure 3</label><caption><p id="d1e3338">Model boundary conditions used for the 2-D models of two-phase flow with four different solid flow patterns: <bold>(a)</bold> stagnant, <bold>(b)</bold> Couette flow, <bold>(c)</bold> convective flow, and <bold>(d, e)</bold> subduction corner flow.</p></caption>
            <?xmltex \igopts{width=398.338583pt}?><graphic xlink:href="https://se.copernicus.org/articles/15/23/2024/se-15-23-2024-f03.png"/>

          </fig>

      <p id="d1e3359">The Dirichlet liquid boundary condition at the bottom boundary is specified using a Gaussian function:</p>
      <p id="d1e3363"><disp-formula id="Ch1.E16" content-type="numbered"><label>16</label><mml:math id="M158" display="block"><mml:mrow><mml:mi>f</mml:mi><mml:mfenced close=")" open="("><mml:mi>x</mml:mi></mml:mfenced><mml:mo>=</mml:mo><mml:msup><mml:mi>e</mml:mi><mml:mrow><mml:mfenced close=")" open="("><mml:mrow><mml:mo>-</mml:mo><mml:mstyle scriptlevel="+1"><mml:mfrac><mml:mrow><mml:msup><mml:mfenced open="(" close=")"><mml:mrow><mml:mi>x</mml:mi><mml:mo>-</mml:mo><mml:msub><mml:mi>x</mml:mi><mml:mi>c</mml:mi></mml:msub></mml:mrow></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:msup><mml:mi mathvariant="italic">σ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mfenced></mml:mrow></mml:msup><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula></p>
      <p id="d1e3412">where <inline-formula><mml:math id="M159" display="inline"><mml:mrow><mml:msub><mml:mi>x</mml:mi><mml:mi>c</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">25</mml:mn></mml:mrow></mml:math></inline-formula> (25 km) is the location of the maximum liquid and <inline-formula><mml:math id="M160" display="inline"><mml:mi mathvariant="italic">σ</mml:mi></mml:math></inline-formula> is the standard deviation, set equal to 1 (1 km). A zero compaction pressure gradient (i.e., a zero liquid flux condition) is prescribed at all the boundaries. The initial porosity field is set to zero over the entire domain.</p>
      <p id="d1e3437">A constant time step of 0.02 (2000 years) is used to satisfy the Courant criterion. The liquid flow is calculated for a model time of 300 (30 Myr). We use square elements of size <inline-formula><mml:math id="M161" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>/</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:math></inline-formula> (i.e., a length of <inline-formula><mml:math id="M162" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>/</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:math></inline-formula>) to aid the accuracy of the solution (Dohmen and Schmeling, 2021).</p>
</sec>
<sec id="Ch1.S4.SS1.SSS2">
  <label>4.1.2</label><title>Result</title>
      <p id="d1e3475">In both the capped and uncapped experiments, the solitary waves ascend vertically from the bottom boundary. With time, the waves tend to become vertically elongated, eventually merging into a channel with periodic highs and lows of porosity (Fig. 4a and b). In the uncapped experiment, negative porosity values down to <inline-formula><mml:math id="M163" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">0.08</mml:mn></mml:mrow></mml:math></inline-formula> occur near the ascending wave in the lower model domain. The negative porosity values tend to disappear as the wave passes through the upper model domain, and the entire porosity field is positive after a model time of <inline-formula><mml:math id="M164" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">150</mml:mn></mml:mrow></mml:math></inline-formula>. With time, the porosity fields in both experiments do not reach a steady state but instead exhibit a periodic behavior, resulting in a periodic integrated volume flux at the top wall boundary (<inline-formula><mml:math id="M165" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mrow><mml:mi mathvariant="normal">flux</mml:mi><mml:mo>,</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="normal">top</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>) (Fig. 4c). Overall, the evolution of solitary waves is similar in both experiments.</p>

      <?xmltex \floatpos{p}?><fig id="Ch1.F4"><?xmltex \currentcnt{4}?><?xmltex \def\figurename{Figure}?><label>Figure 4</label><caption><p id="d1e3519"><bold>(a, b)</bold> Snapshots of the porosity fields from the capped and uncapped experiments at model times of 296.50 and 295.96, respectively. The maximum porosities are depicted. <bold>(c)</bold> Evolution of the integrated volume flux through the top boundary (<inline-formula><mml:math id="M166" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mrow><mml:mi mathvariant="normal">flux</mml:mi><mml:mo>,</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="normal">top</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>) in both experiments from a model time of 270 to a model time of 300. <bold>(d)</bold> The net accumulated volume of liquid (<inline-formula><mml:math id="M167" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">acc</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) over the model domain in both experiments from a model time of 0 to 300. <bold>(e)</bold> The net volume flux of liquid (<inline-formula><mml:math id="M168" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">flux</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) through the model liquid boundaries in both experiments from a model time of 0 to 300. <bold>(f)</bold> The relative volume-balance error (<inline-formula><mml:math id="M169" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>) in both experiments from a model time of 0 to 300.</p></caption>
            <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://se.copernicus.org/articles/15/23/2024/se-15-23-2024-f04.png"/>

          </fig>

      <p id="d1e3589">In the capped experiment, the accumulated volume of liquid (<inline-formula><mml:math id="M170" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">acc</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) first increases until a model time of 50 and then decreases to a stable value at a model time of <inline-formula><mml:math id="M171" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">150</mml:mn></mml:mrow></mml:math></inline-formula> (Fig. 4d). The accumulated volume of liquid in the uncapped experiment follows a similar trend but is lower than that in the capped experiment after a model time of 50. The small difference in the stable value of <inline-formula><mml:math id="M172" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">acc</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> between the experiments is solely due to the capping, which leads to a small overestimation of the integrated porosity over the model domain at each time step. The capped and uncapped experiments show a similar evolution of the net volume flux of liquid (<inline-formula><mml:math id="M173" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">flux</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) through the model boundaries (Fig. 4e). The negative sign of net volume flux indicates that the amount of liquid which enters through the bottom model boundary is larger than the amount which leaves the top boundary. The net volume flux also stabilizes after a model time of <inline-formula><mml:math id="M174" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">150</mml:mn></mml:mrow></mml:math></inline-formula>, indicating that the integrated volume influx of liquid is balanced by the integrated volume outflux of liquid through the model boundaries.</p>
      <p id="d1e3646">The evolution of the relative volume-balance error (Fig. 4f) illustrates the influence of the enforced positive porosity in the capped experiment. The enforcement results in an overestimation of the net accumulated volume of liquid until a model time of <inline-formula><mml:math id="M175" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">150</mml:mn></mml:mrow></mml:math></inline-formula>, yielding an increase in volume relative to that in the uncapped experiment (Fig. 4d). The negative porosity that is allowed in the uncapped experiment leads to a smaller accumulated volume of liquid and a more accurate volume balance. By a model time of 300, the relative errors in the capped and uncapped experiments are 1.71 % and of the order of 10<inline-formula><mml:math id="M176" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> %, respectively.</p>
</sec>
</sec>
<sec id="Ch1.S4.SS2">
  <label>4.2</label><title>Liquid flow through a Couette flow of a porous solid</title>
<sec id="Ch1.S4.SS2.SSS1">
  <label>4.2.1</label><title>Model setup</title>
      <p id="d1e3688">Here, we consider the evolution of a liquid flow through a Couette flow of a porous solid from left to right (maximum solid velocity: 3, equal to 3 cm yr<inline-formula><mml:math id="M177" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) using the same model domain, boundary conditions, and methods shown in Sect. 4.1.1 (Fig. 3b). No porosity is brought in by the Couette flow across the left boundary.</p>
</sec>
<?pagebreak page30?><sec id="Ch1.S4.SS2.SSS2">
  <label>4.2.2</label><title>Result</title>
      <p id="d1e3711">Due to the Couette flow, the solitary waves originating from the bottom boundary are diverted rightwards in both the capped and uncapped experiments (Fig. 5a and b). With time, the solitary waves tend to form channels displaying periodic highs and lows of porosity in both experiments, leading to very similar peak volume outfluxes of liquid at the right boundary (Fig. 5c). However, the uncapped experiment additionally develops two negative-porosity channels under the positive-porosity channel, yielding negative-volume outfluxes of liquid at the right boundary (at <inline-formula><mml:math id="M178" display="inline"><mml:mi>y</mml:mi></mml:math></inline-formula> coordinates ranging from 29.62 to 45.52 and from 47.46 to 48.85).</p>

      <?xmltex \floatpos{p}?><fig id="Ch1.F5" specific-use="star"><?xmltex \currentcnt{5}?><?xmltex \def\figurename{Figure}?><label>Figure 5</label><caption><p id="d1e3723"><bold>(a, b)</bold> Snapshots of the non-dimensional porosity fields from the capped and uncapped experiments at model times of 298.02 and 298.92, respectively. The maximum and minimum porosities are depicted. <bold>(c)</bold> Volume fluxes over the right boundary from both experiments at the model times shown in panels <bold>(a)</bold> and <bold>(b)</bold>. <bold>(d)</bold> Evolution of the integrated volume flux through the right boundary (<inline-formula><mml:math id="M179" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mrow><mml:mi mathvariant="normal">flux</mml:mi><mml:mo>,</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="normal">right</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>) from both experiments at model times from 270 to 300. <bold>(e)</bold> The net accumulated volume of liquid (<inline-formula><mml:math id="M180" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">acc</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) over the model domain from both experiments. <bold>(f)</bold> The net volume flux of liquid (<inline-formula><mml:math id="M181" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">flux</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) through the model liquid boundaries from both experiments. <bold>(g)</bold> The relative volume-balance error (<inline-formula><mml:math id="M182" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>) in both experiments from a model time of 0 to 300.</p></caption>
            <?xmltex \igopts{width=412.564961pt}?><graphic xlink:href="https://se.copernicus.org/articles/15/23/2024/se-15-23-2024-f05.png"/>

          </fig>

      <p id="d1e3802">The time evolutions of the integrated volume outfluxes of liquid at the right boundary (<inline-formula><mml:math id="M183" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mrow><mml:mi mathvariant="normal">flux</mml:mi><mml:mo>,</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="normal">right</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>) show that the fluxes slowly and asymptotically converge (Fig. 5d). Additional experiments were performed for a longer model time of 1000, and those reached a steady state (not shown). The capped experiment shows a larger <inline-formula><mml:math id="M184" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">acc</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> than the uncapped experiment from the early stages to the end of the modeling period (Fig. 5e). In particular, the asymptotic value of <inline-formula><mml:math id="M185" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">acc</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> in the capped experiment remains approximately 30 % higher than that in the uncapped experiment. The net volume fluxes of liquid in the two experiments show a pronounced divergence in behavior after a modeling time of <inline-formula><mml:math id="M186" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">25</mml:mn></mml:mrow></mml:math></inline-formula> (Fig. 5f). While <inline-formula><mml:math id="M187" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">flux</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> in the capped experiment increases with time from negative values (indicating an influx) in the early stages to positive values (indicating an outflux) in the later stages, <inline-formula><mml:math id="M188" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">flux</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> stabilizes to an apparent steady state in the uncapped experiment. This indicates that the integrated volume outflux exceeds the integrated volume influx through the model boundaries in the capped experiment. On the contrary, the stable value of <inline-formula><mml:math id="M189" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">flux</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> in the uncapped experiment indicates that the integrated volume influx of liquid is balanced by the integrated volume outflux of liquid through the model boundaries. Both <inline-formula><mml:math id="M190" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">acc</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M191" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">flux</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> are well balanced in the uncapped experiment, and the relative volume-balance error remains very small (0.09 % at a model time of 300). Similar to the behavior of <inline-formula><mml:math id="M192" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">flux</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, the relative volume-balance error in the capped experiment greatly and continuously increases with model time (reaching 332 % at a model time of 300) even after the model starts to reach a steady state, whereas the error in the uncapped experiment diminishes with time (Fig. 5g).</p>
      <p id="d1e3922">The enforced positive porosity in the capped experiment leads to a larger net accumulated volume of liquid compared to that in the uncapped experiment, in which the accumulated volume is counterbalanced by negative porosity. Thus, <inline-formula><mml:math id="M193" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">acc</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is overestimated in the capped experiment relative to the uncapped experiment, and the higher accumulated porosity leads to an overestimation of the integrated volume outflux through the right boundary, as seen in the distribution of volume flux (Fig. 5c) and the integrated value over time (Fig. 5d). The increase in the outflux is not sufficient to completely offset the increase in the accumulated porosity.<?pagebreak page31?> As a consequence, the accumulated porosity, the net volume (out)flux of liquid through the model boundaries, and the relative volume-balance error continuously increase (Fig. 5e and f).</p>
</sec>
</sec>
<sec id="Ch1.S4.SS3">
  <label>4.3</label><title>Liquid flow through a convective porous solid</title>
<sec id="Ch1.S4.SS3.SSS1">
  <label>4.3.1</label><title>Model setup</title>
      <p id="d1e3952">Here, we consider the evolution of the liquid flow through a convective porous solid using the same model domain, boundary conditions, and methods shown in Sect. 4.1.1 (Fig. 3c). We apply free slip to all four boundaries to solve the solid flow. To solve the heat equation, the top and bottom temperatures are fixed at 0 and 1 (0 and 1000 <inline-formula><mml:math id="M194" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C), respectively, and the left and right walls are prescribed as having a zero heat-flux boundary condition. The quasi-steady state convective flow is first calculated by solving Eqs. (1)–(3) for a model time of 500 (50 Myr). Then, the liquid flow is calculated for a model time of 300 (30 Myr). No porosity influx by solid advection is allowed across any of the four boundaries, whereas porosity outflux is allowed (i.e., there are free-outflux and zero-influx boundary conditions).</p>
</sec>
<sec id="Ch1.S4.SS3.SSS2">
  <label>4.3.2</label><title>Results</title>
      <p id="d1e3972">Due to the clockwise solid convection, the solitary waves ascending from the bottom boundary are diverted leftwards and rightwards in the lower and upper model domains, respectively, in both the capped and uncapped experiments (Fig. 6a and b). Most of the ascending liquid leaves the domain through the top boundary, but a fraction of it continues to be entrained in the convective solid and remains within the domain. The entrained liquid then merges with newly ascending liquid from the bottom boundary. With time, the waves tend to form a quasi-steady-state channel in the capped experiment, which leads to a quasi-steady-state integrated volume outflux of liquid (which slowly increases) through the top boundary (<inline-formula><mml:math id="M195" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mrow><mml:mi mathvariant="normal">flux</mml:mi><mml:mo>,</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="normal">top</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>) (Fig. 6c). On the contrary, the porosity field in the uncapped experiment does not converge to a steady state by the end of the modeling period. This also leads to an unsteady integrated volume outflux of liquid through the top boundary. Negative porosity values occur near the liquid pathway by the end of the modeling period, decreasing the integrated volume outflux of liquid at the top boundary.</p>

      <?xmltex \floatpos{p}?><fig id="Ch1.F6"><?xmltex \currentcnt{6}?><?xmltex \def\figurename{Figure}?><label>Figure 6</label><caption><p id="d1e3994"><bold>(a, b)</bold> Snapshots of the non-dimensional porosity fields from the capped and uncapped experiments at a model time of 297.80. The maximum and minimum porosities are depicted. <bold>(c)</bold> Evolution of the integrated volume flux through the top boundary (<inline-formula><mml:math id="M196" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mrow><mml:mi mathvariant="normal">flux</mml:mi><mml:mo>,</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="normal">top</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>) in both experiments from a model time of 270 to 300. <bold>(d)</bold> The accumulated volume of liquid (<inline-formula><mml:math id="M197" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">acc</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) over the model domain from both experiments. <bold>(e)</bold> The net volume flux of liquid (<inline-formula><mml:math id="M198" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">flux</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) through the model liquid boundaries from both experiments. <bold>(f)</bold> The relative volume-balance error (<inline-formula><mml:math id="M199" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>) in both experiments from a model time of 0 to 300.</p></caption>
            <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://se.copernicus.org/articles/15/23/2024/se-15-23-2024-f06.png"/>

          </fig>

      <?pagebreak page33?><p id="d1e4064">In both the capped and uncapped experiments, the evolution of <inline-formula><mml:math id="M200" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">acc</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> can be divided into three stages (Fig. 6d). First, there is a transient stage (0 to <inline-formula><mml:math id="M201" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">40</mml:mn></mml:mrow></mml:math></inline-formula>) corresponding to the time taken for the first solitary wave to ascend through the model domain and reach the top boundary. A second transient stage (<inline-formula><mml:math id="M202" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">40</mml:mn></mml:mrow></mml:math></inline-formula> to <inline-formula><mml:math id="M203" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">120</mml:mn></mml:mrow></mml:math></inline-formula>) corresponds to the time taken for a fraction of the liquid of the first solitary wave to be advected downwards by the convective cell and merge with solitary waves that have entered the domain and ascended from the bottom boundary. The second stage ends when these merged solitary waves reach the top domain. A third stage (<inline-formula><mml:math id="M204" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">120</mml:mn></mml:mrow></mml:math></inline-formula> to the end) corresponds to the period in which the entrained liquid continues to merge with the solitary waves that ascend from the bottom boundary and the rotating porosity channel reaches a semi-steady state. The capped experiment shows an increasing <inline-formula><mml:math id="M205" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">acc</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> during all of these stages, even in the third stage, whereas the uncapped experiment shows a stable value during the third stage. On the contrary, the net volume fluxes of liquid (<inline-formula><mml:math id="M206" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">flux</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) are equally stable (they very slowly decrease) in both experiments after a model time of <inline-formula><mml:math id="M207" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">150</mml:mn></mml:mrow></mml:math></inline-formula> in the third stage (Fig. 6e). The relative volume-balance error (<inline-formula><mml:math id="M208" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>) in the capped experiment displays a net increase with time and reaches 17.3 % at a model time of 300. However, in the uncapped experiment, it slowly decreases with time and reaches <inline-formula><mml:math id="M209" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2.8</mml:mn></mml:mrow></mml:math></inline-formula> % at the same time (Fig. 6f).</p>
      <p id="d1e4169">As in Sects. 4.1 and 4.2, the enforced positive porosity in the capped experiment results in an overestimation of <inline-formula><mml:math id="M210" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">acc</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. The overestimation is relatively small until a model time of <inline-formula><mml:math id="M211" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">30</mml:mn></mml:mrow></mml:math></inline-formula> but becomes significantly larger when the first porosity wave reaches the top boundary at a model time between <inline-formula><mml:math id="M212" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">30</mml:mn></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M213" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">40</mml:mn></mml:mrow></mml:math></inline-formula>. Between model times of <inline-formula><mml:math id="M214" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">30</mml:mn></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M215" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">40</mml:mn></mml:mrow></mml:math></inline-formula>, we also observe a slightly higher <inline-formula><mml:math id="M216" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">flux</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> in the capped experiment, which indicates that the outflux is slightly larger than that in the uncapped experiment owing to the enforced positive porosity. The relative volume-balance error also undergoes a fast increase between model times of <inline-formula><mml:math id="M217" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">30</mml:mn></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M218" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">40</mml:mn></mml:mrow></mml:math></inline-formula> in the capped experiment, which is not observed in the uncapped experiment. During the second stage, the impact of the enforced positive porosity on <inline-formula><mml:math id="M219" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">acc</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is relatively small, as illustrated by the similar evolution of <inline-formula><mml:math id="M220" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">acc</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> in the two experiments before a model time of <inline-formula><mml:math id="M221" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">120</mml:mn></mml:mrow></mml:math></inline-formula>. Thus, both experiments show stable relative volume-balance errors, though a slight decrease in the relative volume-balance error with time is observed in the uncapped experiment. During the third stage, however, large divergences between the experiments are seen in <inline-formula><mml:math id="M222" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">acc</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and the relative volume-balance error. The enforced positive porosity mostly impacts <inline-formula><mml:math id="M223" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">acc</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, which undergoes a substantial increase with time in the capped experiment. This is because the overestimated <inline-formula><mml:math id="M224" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">acc</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> progressively impacts newly ascending liquid volumes. On the contrary, although <inline-formula><mml:math id="M225" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">flux</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is always slightly larger in the capped experiment, the difference in <inline-formula><mml:math id="M226" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">flux</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> between the experiments remains stable throughout the third stage. This shows that the continuous increase in relative volume-balance error recorded in the capped experiment is solely due to the overestimation of <inline-formula><mml:math id="M227" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">acc</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>. As observed for the previous models (Sects. 4.1 and 4.2), the volume balance is better maintained in the uncapped experiment.</p>
</sec>
</sec>
<?pagebreak page34?><sec id="Ch1.S4.SS4">
  <label>4.4</label><title>Liquid flow through a subduction corner flow</title>
<sec id="Ch1.S4.SS4.SSS1">
  <label>4.4.1</label><title>Model setup</title>
      <p id="d1e4381">Lastly, we consider the evolution of the liquid flow through a subduction corner flow in which the solid-state flow in the corner wedge is kinematically driven by the subducting slab. The height and width of the model are 50 and 52.8 (equal to 50 and 52.8 km), respectively (Fig. 3d). The subducting slab has a dip of 45<inline-formula><mml:math id="M228" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> and a subduction rate of 5 (5 cm yr<inline-formula><mml:math id="M229" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>).</p>
      <p id="d1e4405">To solve the solid flow, free-slip and open-boundary conditions are prescribed for the top and right boundaries of the mantle wedge, respectively (Fig. 3d). To reach steady-state corner flow in the mantle wedge, Eqs. (1) and (2) without the buoyancy term in Eq. (2) are solved for a modeling period of 500 (50 Myr) (e.g., Yu and Lee, 2018).</p>
      <p id="d1e4408">To solve the liquid flow, free-outflux and zero-influx boundary conditions are prescribed for all the boundaries except for the base of the uppermost slab layer, which is prescribed as having zero porosity (Fig. 3e). A zero gradient of compaction pressure is prescribed for all the boundaries. A Gaussian source term (the same function as in Eq. 16) for <inline-formula><mml:math id="M230" display="inline"><mml:mi mathvariant="normal">Γ</mml:mi></mml:math></inline-formula> in Eqs. (4) and (5) is applied within the uppermost slab layer over a thickness of 2 (2 km). The source term is a simplified proxy for a dehydration reaction that would produce some liquid within the uppermost slab layer. To discretize the slab and wedge geometry, we use an unstructured mesh consisting of triangular elements that are slightly smaller than a quarter of the compaction length. The liquid flow is calculated by solving Eqs. (4) and (5) for a model time of 300 (30 Myr) with a constant time step of 0.004 (400 years).</p>
</sec>
<sec id="Ch1.S4.SS4.SSS2">
  <label>4.4.2</label><title>Results</title>
      <p id="d1e4426">The general trends for the liquid flow in the wedge are similar in both the capped and uncapped experiments, both of which tend toward stable dynamics after a model time of 50. Due to the downdip solid flow, the solitary waves originating from the top layer tend to be diverted slightly rightwards as they ascend through the bottom half of the wedge. In the top half of the wedge, the inward (leftward) corner flow causes leftward advection of the ascending waves before they reach the top boundary (Fig. 7a and b). Although most of the liquid passes upward through the wedge, a fraction of it is entrained by the corner flow and leaves the model domain across the right boundary.</p>

      <?xmltex \floatpos{p}?><fig id="Ch1.F7"><?xmltex \currentcnt{7}?><?xmltex \def\figurename{Figure}?><label>Figure 7</label><caption><p id="d1e4431"><bold>(a, b)</bold> Snapshots of the non-dimensional porosity fields from the capped and uncapped experiments at model times of 298.52 and 297.42, respectively. The maximum and minimum porosities are depicted. <bold>(c, d)</bold> Evolution of the integrated volume flux through the top and right boundaries (<inline-formula><mml:math id="M231" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mrow><mml:mi mathvariant="normal">flux</mml:mi><mml:mo>,</mml:mo><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="normal">top</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M232" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mrow><mml:mi mathvariant="normal">flux</mml:mi><mml:mo>,</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="normal">right</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>) in both experiments from a model time of 270 to 300. <bold>(e)</bold> The accumulated volume of liquid (<inline-formula><mml:math id="M233" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">acc</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) over the model domain from both experiments. <bold>(f)</bold> The net volume flux of liquid (<inline-formula><mml:math id="M234" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">flux</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) through the model liquid boundaries from both experiments. <bold>(g)</bold> The absolute volume-balance relative error (<inline-formula><mml:math id="M235" display="inline"><mml:mi mathvariant="normal">Δ</mml:mi></mml:math></inline-formula>) in both experiments from a model time of 0 to 300.</p></caption>
            <?xmltex \igopts{width=219.08622pt}?><graphic xlink:href="https://se.copernicus.org/articles/15/23/2024/se-15-23-2024-f07.png"/>

          </fig>

      <?pagebreak page35?><p id="d1e4518">Both the capped and uncapped experiments yield periodic high and low volume fluxes at the top and right boundaries (<inline-formula><mml:math id="M236" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mrow><mml:mi mathvariant="normal">flux</mml:mi><mml:mo>,</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="normal">top</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M237" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mrow><mml:mi mathvariant="normal">flux</mml:mi><mml:mo>,</mml:mo><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="normal">right</mml:mi></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>). These fluxes correspond to solitary waves reaching the top boundary after their ascent from the top of the subducting slab and to the downdip advection of a fraction of them, respectively (Fig. 7c and d). The amplitudes and periods of the volume fluxes at the top boundary remain very similar in both experiments. At the right boundary, the periods of the volume fluxes are also very similar, but the amplitude at the right boundary is larger in the capped experiment.</p>
      <p id="d1e4556">Compared to that in the capped experiment, the uncapped experiment shows a lower <inline-formula><mml:math id="M238" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">acc</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> due to the negative porosity field in the model domain. Similarly, <inline-formula><mml:math id="M239" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">flux</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is lower, due to the lower outflux at the right boundary (Fig. 7e and f). As a result, the difference in <inline-formula><mml:math id="M240" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">flux</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> between the experiments increases with time. The capped experiment yields a relative volume-balance error of 337.17 % at a model time of 300, whereas it is only <inline-formula><mml:math id="M241" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.85</mml:mn></mml:mrow></mml:math></inline-formula> % in the uncapped experiment. (Fig. 7g). Thus, a better balance between <inline-formula><mml:math id="M242" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">acc</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M243" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Φ</mml:mi><mml:mi mathvariant="normal">flux</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is maintained when negative porosity is allowed in the uncapped experiment.</p>
</sec>
</sec>
<sec id="Ch1.S4.SS5">
  <label>4.5</label><title>Effect of element size on the relative error in time-dependent problems</title>
      <p id="d1e4634">To check the sensitivity of our results to the choice of element size, we run additional experiments with square element sizes of <inline-formula><mml:math id="M244" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>/</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M245" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>/</mml:mo><mml:mn mathvariant="normal">8</mml:mn></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M246" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>/</mml:mo><mml:mn mathvariant="normal">16</mml:mn></mml:mrow></mml:math></inline-formula> (lengths of <inline-formula><mml:math id="M247" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>/</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M248" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>/</mml:mo><mml:mn mathvariant="normal">8</mml:mn></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M249" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>/</mml:mo><mml:mn mathvariant="normal">16</mml:mn></mml:mrow></mml:math></inline-formula>, respectively), which provide 5, 17, and 33 nodes per compaction length, respectively, for the stagnant solid, Couette flow, and convective flow experiments. For the subduction corner flow experiment, triangular elements with sizes that are slightly smaller than <inline-formula><mml:math id="M250" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>/</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M251" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>/</mml:mo><mml:mn mathvariant="normal">8</mml:mn></mml:mrow></mml:math></inline-formula>, and <inline-formula><mml:math id="M252" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>/</mml:mo><mml:mn mathvariant="normal">16</mml:mn></mml:mrow></mml:math></inline-formula> are additionally considered. We run all the experiments up to a model time of 300.</p>
      <p id="d1e4764">All the stagnant porous solid experiments show similar porosity evolutions regardless of the element size chosen. It is important to note that the uncapped and capped experiments converge towards different minimum errors. A significant decrease in the relative volume-balance error is observed with increasing mesh resolution in the uncapped experiments; the error diminishes to <inline-formula><mml:math id="M253" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2.04</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> % in the experiment using the finest mesh resolution (Fig. 8a). The error in the capped experiments slightly decreases with increasing mesh resolution (from <inline-formula><mml:math id="M254" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">1.83</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="italic">%</mml:mi></mml:mrow></mml:math></inline-formula> to <inline-formula><mml:math id="M255" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">1.69</mml:mn></mml:mrow></mml:math></inline-formula> % over the range of mesh resolutions), but a relatively large error remains regardless of the mesh resolution. This indicates that enforced positive porosity results in intrinsic errors due to overestimations of the porosity in the model domain and the outflux at the top boundary.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F8"><?xmltex \currentcnt{8}?><?xmltex \def\figurename{Figure}?><label>Figure 8</label><caption><p id="d1e4814">Relative volume-balance error calculated from capped and uncapped experiments with various element sizes ranging between <inline-formula><mml:math id="M256" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>/</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M257" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>/</mml:mo><mml:mn mathvariant="normal">16</mml:mn></mml:mrow></mml:math></inline-formula>: <bold>(a)</bold> stagnant solid, <bold>(b)</bold> Couette flow, <bold>(c)</bold> convective flow, and <bold>(d)</bold> subduction corner flow.</p></caption>
          <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://se.copernicus.org/articles/15/23/2024/se-15-23-2024-f08.png"/>

        </fig>

      <p id="d1e4867">All the other experiments (those for Couette flow, convective flow, and subduction corner flow) show similar porosity evolutions regardless of the element size chosen. In all cases, the uncapped experiment always shows better liquid volume conservation (i.e., smaller absolute error values) with the increase in mesh resolution because the outflux at the boundaries is more accurately calculated at increased mesh resolution (Fig. 8b–d). The increase in mesh resolution in the capped experiments does not remove the intrinsic error that results from the overestimated porosity in the model domain and the subsequent overestimation of the outflux at the boundaries, though the outflux at the boundaries is more accurately calculated at increased mesh resolution.</p>
</sec>
</sec>
<sec id="Ch1.S5" sec-type="conclusions">
  <label>5</label><title>Discussion and conclusion</title>
      <p id="d1e4880">In this study, we first conducted a series of benchmarking experiments against a semi-analytical solution for solitary waves (Simpson and Spiegelman, 2011). Although the specifics of the numerical approach used in the study (nonlinear solvers, finite element order, continuous Galerkin finite elements, etc.) differ from those used in previous studies (e.g., Simpson and Spiegelman, 2011; Wilson et al., 2017; Wang et al., 2019), we obtain a relatively accurate solution when the element size is <inline-formula><mml:math id="M258" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>/</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula> or smaller (i.e., five or more nodes per compaction length). The impact of element size on the solution accuracy is consistent with previous studies (Dohmen and Schmeling, 2021), and, as expected, increasing the mesh resolution (decreasing the element size) significantly improves the solution accuracy, partly owing to a reduced numerical diffusion of porosity.</p>
      <p id="d1e4898">Next, we performed time-evolving experiments. Our capped experiments show that the best accuracy for mass conservation occurs in models where the background mantle is stationary (Figs. 4a and 8a) after those models have passed their early stages. In other experiments where the solid flows (Couette flow, convective flow, and subduction corner flow), the error in the mass balance is not negligible owing to the overestimation of porosity induced by the capped porosity and the subsequent overestimation of the mass flux across the model boundaries. Because the overestimation in the capped experiments is intrinsic, increasing the mesh resolution does not significantly reduce the relative volume-balance error (Fig. 8). Thus, the estimated volume<?pagebreak page36?> of liquid in the model domain and the volume flux of liquid through the model boundaries (e.g., the amount of magma in the mantle and the migration of magma through the overlying lithosphere) should be carefully interpreted when the solid phase is deforming. We thus emphasize that, in future applications, caution should be taken when using the melt and flux estimations. However, the distributions of the positive porosity and peaks (the largest positive liquid fractions) in the model domain and boundaries, respectively, are quite similar in both the capped and uncapped experiments. Hence, it is reasonable to use a capped porosity in the compaction equations for assessing the main fluid pathways and the first-order distribution of fluids and melts in the mantle. Models of liquid transport in the mantle with a capped porosity field may be compared to geophysical imaging (e.g., magnetotellurics and seismic tomography) of the asthenosphere, which illuminates the first-order distribution of fluids and melts in, for example, the sub-arc mantle wedges of subduction zones (Mcgary et al., 2014; Cordell et al., 2019; Bie et al., 2022).</p>
</sec>

      
      </body>
    <back><notes notes-type="codeavailability"><title>Code availability</title>

      <p id="d1e4905">The models were run with the commercial finite-element package COMSOL Multiphysics<sup>®</sup> (<uri>https://www.COMSOL.com</uri>, COMSOL, 2023).</p>
  </notes><notes notes-type="dataavailability"><title>Data availability</title>

      <p id="d1e4917">The data used to generate the figures are shared at <ext-link xlink:href="https://doi.org/10.5281/zenodo.8179527" ext-link-type="DOI">10.5281/zenodo.8179527</ext-link> (Lee et al., 2023).</p>
  </notes><notes notes-type="authorcontribution"><title>Author contributions</title>

      <p id="d1e4926">CL and NC conceived the study. CL and NC designed and ran the models, analyzed the results, and wrote the article. DH revised the Python code for the benchmarking experiments and produced the figures. IW wrote the article. All authors discussed the results and their consequences and contributed to the writing of the final article.</p>
  </notes><notes notes-type="competinginterests"><title>Competing interests</title>

      <p id="d1e4932">The contact author has declared that none of the authors has any competing interests.</p>
  </notes><notes notes-type="disclaimer"><title>Disclaimer</title>

      <p id="d1e4938">Publisher’s note: Copernicus Publications remains neutral with regard to jurisdictional claims made in the text, published maps, institutional affiliations, or any other geographical representation in this paper. While Copernicus Publications makes every effort to include appropriate place names, the final responsibility lies with the authors.</p>
  </notes><ack><title>Acknowledgements</title><p id="d1e4944">We thank the editor Juliane Dannberg, the reviewer Samuel Butler, an anonymous reviewer, and Chenyu Tian for their constructive comments which have improved our manuscript.</p></ack><notes notes-type="financialsupport"><title>Financial support</title>

      <p id="d1e4949">This research has been supported by the National Research Foundation of Korea (grant no. 2022R1A2C1004592 for CL and DH) and the National Science Foundation (grants no. EAR-2246804 for IW).</p>
  </notes><notes notes-type="reviewstatement"><title>Review statement</title>

      <p id="d1e4955">This paper was edited by Juliane Dannberg and reviewed by Samuel Butler and one anonymous referee.</p>
  </notes><ref-list>
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